BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D08SP1|AL429568
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig942 926 0.0
3x_Contig508 599 e-171
>3x_Contig942
Length = 3614
Score = 926 bits (467), Expect = 0.0
Identities = 499/507 (98%), Gaps = 2/507 (0%)
Strand = Plus / Plus
Query: 333 ccaataggtccaagttaccaatagcttctattgtatcttctctcttctcaccaggaggat 392
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 4 ccaataggtccaagttaccaataggttatattgtatcttctctcttctcaccaggaggat 63
Query: 393 gtgtaattgatgatacaacgaaagtattgcttgca-gtgtaataaataccctccaccaat 451
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 64 gtgtaattgatgatacaacgaaagtattgcttgcaagtgtaataaataccctcgacgaat 123
Query: 452 acaatacatccaggaacataataagttcccttcgttggtatagcttgctgaaggtgcaat 511
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 acaatacatccaggaaaataataagttcccttcgttggtatagcttgctgaaggtgcaat 183
Query: 512 tcaa-tgctaccgctggggtcttctaaactccaattccccttggaattctgatccagtag 570
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcaaatgctagcgctggggtcttctaaactccaattccccttggaattctgatccagtag 243
Query: 571 tccaagcaatagaaagttcttaccatcatgccctagtaagttttttatttgcgttatctt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccaagcaatagaaagttcttaccatcatgccctagtaagttttttatttgcgttatctt 303
Query: 631 catatatgatgctgaattaagtggagacacatcagattcattcatatgctttcccatctc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catatatgatgctgaattaagtggagacacatcagattcattcatatgctttcccatctc 363
Query: 691 tataatagaagataaaggattgaatatgtcattattctgaaatttttcgtttctaagtac 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tataatagaagataaaggattgaatatgtcattattctgaaatttttcgtttctaagtac 423
Query: 751 cttgtcttttataatgtgatatcgtgtcgtaaatagggaaactttggactcaacattagg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttgtcttttataatgtgatatcgtgtcgtaaatagggaaactttggactcaacattagg 483
Query: 811 aagtttaagttttgcgatcgaaagcat 837
|||||||||||||||||||||||||||
Sbjct: 484 aagtttaagttttgcgatcgaaagcat 510
>3x_Contig508
Length = 2437
Score = 599 bits (302), Expect = e-171
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 1 gatcaaattttcgtaattgcttaggagagtagccaacgcatcgaagttgtttttatacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 gatcaaattttcgtaattgcttaggagagtagccaacgcatcgaagttgtttttatacga 2195
Query: 61 aacggttgcactcacattctttgcgttcaagcttggatgaaccgggacggatacaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 aacggttgcactcacattctttgcgttcaagcttggatgaaccgggacggatacaaaaga 2255
Query: 121 accattaaacacgatcgctactggaggatccgttgttaacttgtcaaatgttttctttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 accattaaacacgatcgctactggaggatccgttgttaacttgtcaaatgttttctttag 2315
Query: 181 tccatccattgtagtcatttcatccaaatatatgtcccctccgagaatgacaaatttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 tccatccattgtagtcatttcatccaaatatatgtcccctccgagaatgacaaatttgtt 2375
Query: 241 atcgctgagctcttgttcaaggtaatgcaatcgtatttttaaatctttatctaaccttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 atcgctgagctcttgttcaaggtaatgcaatcgtatttttaaatctttatctaaccttgc 2435
Query: 301 ca 302
||
Sbjct: 2436 ca 2437
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6155
Number of Sequences: 1807
Number of extensions: 6155
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)